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?1. Because two regions of interest appear to be deleted from the H37Rv genome, we followed the numbering of the recently sequenced M.?tuberculosis F11 strain (NC_009565). The presence of the ��prototype�� insertions was confirmed by PCR in 20 LAM-RUS strains. Of seven major insertions identified, three interrupted the coding sequences, and four were located in the intergenic regions. Four insertion sites were found near the sequences coding for transposases conserved in M.?tuberculosis H37Rv, H37Ra, F11, and CDC1551 genomes. The resurgence of tuberculosis in recent decades in Russia has been accompanied by dramatic increases in the prevalence of drug-resistant cases. Although reliable Otenabant nationwide surveillance data are not available [5], in some regions, the primary MDR rate almost doubled, from 6.9% in 1998 to 13.5% in 2002 [18]. In the present study, the level of drug resistance in new cases find more was almost two-fold higher than the estimated average national level for this period (22% vs. 4�C13%) [19]. We speculated that this level was a result of the epidemic spread of a limited number of highly-resistant strains in the region. This assumption is supported by the strong association of MDR with IS6110-RFLP clustered isolates (p MI-773 supplier LAM-RUS. This may reflect the fact that Beijing strains are generally more transmissible, whereas the treatment of patients infected with LAM-RUS takes longer. The average time from diagnosis to the date of specimen collection was almost twice as long in patients with ST252 LAM-RUS (43.5?��?9.4?months) compared to ST1 Beijing (24.7?��?7.8?month). Beijing strains are usually associated with a high level of drug-resistant tuberculosis and outbreaks [20,21]. This family of strains is highly prevalent in many Russian regions [22,23]. The Beijing family was also associated with a high level of drug resistance in Tula: 25/58 (43.1%) strains with ST1 were MDR. However, in contrast to the other Russian regions, in our setting, the single LAM-RUS strain was a major contributor to the MDR rate. All 55 isolates with the predominant LAM-RUS ST252 spoligotype were MDR, showed a high degree of similarity on IS6110 dendrogram and shared an identical list of mutations conferring drug resistance, thus representing recent clones of a unique MDR strain. The history of incarceration is a widely recognized risk factor for tuberculosis morbidity [24,25]. Prisons serve as TB reservoirs, thus having a significant impact on TB incidence in the civilian population everywhere. However, the actual links between these two settings are poorly documented.